ELEPO21 Publications
| YEAST | |
| Yeast centromere
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Tomokazu Kurita, Masako Iwai, Keishi Moroi, Kumiko Okazaki, Seiji Nomura, Fumihiko Saito, Shinichiro Maeda, Akihide Takami, Atsushi Sakamoto, Hiroyuki Ohta,
Tetsushi Sakuma, Takashi Yamamoto Sci Rep. 2022 Feb 15;12(1):2480. doi: 10.1038/s41598-022-06495-y.
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| Schizosaccharo-
myces pombe |
Yuko Takayama
Identification of Genes Encoding CENP-A and Heterochromatin Protein 1 of Lipomyces starkeyi and Functional Analysis Using Schizosaccharomyces pombe Genes (Basel). 2020 Jul 8;11(7):E769. |
| BACTERIA | |
| Corynebacterium glutamicum
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Kyoshiro Nonaka, Tatsuya Osamura, Fumikazu Takahashi
Microb Cell Fact. 2023 Aug 29;22(1):168. doi: 10.1186/s12934-023-02179-y.
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| Bacterial Chromosomes
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Hironobu Fujita, Ayane Osaku, Yuto Sakane, Koki Yoshida, Kayoko Yamada, Seia Nara, Takahito Mukai, Masayuki Su’etsugu
Enzymatic Supercoiling of Bacterial Chromosomes Facilitates Genome Manipulation ACS Synth Biol. 2022 Sep 16;11(9):3088-3099. doi: 10.1021/acssynbio.2c00353. Epub 2022 Aug 23.
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| Escherichia coli
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Tatsuya Yoneji, Hironobu Fujita, Takahito Mukai, Masayuki Su’etsugu
Nucleic Acids Res. 2021 Sep 7;49(15):8407-8418. doi: 10.1093/nar/gkab298.
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| E. coli
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Masahiro Maruoka, Panpan Zhang, Hiromi Mori, Eiichi Imanishi, Daniel M Packwood, Hiroshi Harada, Hidetaka Kosako, Jun Suzuki
Mol Cell. 2021 Apr 1;81(7):1397-1410.e9.
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| Staphylococcus aureus
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Kotaro Kiga, Xin-Ee Tan, Rodrigo Ibarra-Chávez, Shinya Watanabe, Yoshifumi Aiba, Yusuke Sato’o, Feng-Yu Li, Teppei Sasahara, Bintao Cui, Moriyuki Kawauchi, Tanit Boonsiri, Kanate Thitiananpakorn, Yusuke Taki, Aa Haeruman Azam, Masato Suzuki, José R Penadés, Longzhu Cui
Nat Commun. 2020 Jun 10;11(1):2934. |
| Yusuke Sato’o, Yoshifumi Aiba, Kotaro Kiga, Shinya Watanabe, Teppei Sasahara, Yasuhiko Hayakawa, Longzhu Cui
J Microbiol Methods . 2018 Mar;146:25-32. |
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| Junzo Hisatsune 1, Yusuke Sato’o 1, Liansheng Yu 1, Shoko Kutsuno 1, Yasuhiko Hayakawa 2, Motoyuki Sugai 3
Efficient transformation of Staphylococcus aureus using multi-pulse electroporation J Microbiol Method. 2016 Nov;130:69-72. doi: 10.1016/j.mimet.2016.08.012. Epub 2016 Aug 24. |
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| Yusuke Sato’o, Junzo Hisatsune, Liansheng Yu, Tetsushi Sakuma, Takashi Yamamoto, Motoyuki Sugai
Tailor-made gene silencing of Staphylococcus aureus clinical isolates by CRISPR interference PLoS One. 2018 Jan 29;13(1):e0185987. doi: 10.1371/journal.pone.0185987. eCollection 2018. |
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| Lactococcus lactis and Lactobacillus casei | Dennis L Welker, Bryan M Coburn, John H McClatchy, Jeff R Broadbent
Multiple pulse electroporation of lactic acid bacteria Lactococcus lactis and Lactobacillus casei J Microbiol Methods. 2019 Nov;166:105741. doi: 10.1016/j.mimet.2019.105741. Epub 2019 Oct 18. |
| Staphylococci
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Yusuke Sato’o, Yoshifumi Aiba, Kotaro Kiga, Shinya Watanabe, Teppei Sasahara, Yasuhiko Hayakawa, Longzhu Cui
J Microbiol Methods. 2018 Mar;146:25-32. doi: 10.1016/j.mimet.2018.01.006. Epub 2018 Feb 3. |
| Edwardsiella tarda
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C Kataoka, H Tomiyama, S Kashiwada
J Fish Dis. 2017 Apr;40(4):479-484. doi: 10.1111/jfd.12522. Epub 2016 Jul 15.
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| FUNGUS | |
| Batrachochytrium dendrobatidis | Erik Kalinka, Stephanie M. Brody, Andrew J. M. Swafford, Edgar M. Medina, Lillian K. Fritz-Laylin
Genetic transformation of the frog-killing chytrid fungus Batrachochytrium dendrobatidis October 17, 2023, https://doi.org/10.1101/2023.10.17.561934 |
| Schizosaccharomyces pombe | Yuko Takayama
Genes (Basel). 2020 Jul 8;11(7):769. doi: 10.3390/genes11070769.
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| GREEN ALGAE | |
| Closterium
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Junko Kawai, Manaki Kanazawa, Rie Suzuki, Nanako Kikuchi, Yasuhiko Hayakawa, Hiroyuki Sekimoto
Highly efficient transformation of the model zygnematophycean alga Closterium peracerosum–strigosum-littorale complex by square-pulse electroporation New Phytol. 2022 Jan;233(1):569-578. doi: 10.1111/nph.17763. Epub 2021 Oct 20. |
| Parachlorella kessleri strain NIES-2152
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Yuki Kasai, Satsuki Takagi, Shuhei Ota, Kotaro Ishii, Tsuyoshi Takeshita, Shigeyuki Kawano, Shigeaki Harayama
Parachlorella kessleri strain NIES-2152 Research Square. 28 August 2023 Reprint, not yet peer reviewed
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| Review
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Megan Mosey, Damien Douchi, Eric P. Knoshaug, Lieve M.L. Laurens
Methodological review of genetic engineering approaches for non-model algae Algal Research. Volume 54, April 2021, 102221
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| Coccomyxa
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Yuya Yoshimitsu, Jun Abe, Shigeaki Harayama
Biotechnol Biofuels. 2018 Dec 10;11:326. doi: 10.1186/s13068-018-1327-1. eCollection 2018.
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| Pseudochoricystis ellipsoidea | Sousuke Imamura, Daisuke Hagiwara, Fumi Suzuki, Norihide Kurano, Shigeaki Harayama
J Gen Appl Microbiol. 2012;58(1):1-10. doi: 10.2323/jgam.58.1.
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| MICROALGAE | |
| Nannochloropsis
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Tomokazu Kurita, Masako Iwai, Hiroyuki Ohta, Tetsushi Sakuma, Takashi Yamamoto
Genome editing for biodiesel production in oleaginous microalga, Nannochloropsis species Gene and Genome Editing, Volume 6, December 2023, 100027
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| CELLS | |
| Masakazu Kurita, Toshikazu Araoka, Tomoaki Hishida, David D O’Keefe, Yuta Takahashi, Akihisa Sakamoto, Masahiro Sakurai, Keiichiro Suzuki, Jun Wu, Mako Yamamoto,
Reyna Hernandez-Benitez, Alejandro Ocampo, Pradeep Reddy, Maxim Nikolaievich Shokhirev, Pierre Magistretti, Estrella Núñez Delicado, Hitomi Eto, Kiyonori Harii, Juan Carlos Izpisua Belmonte In vivo reprogramming of wound-resident cells generates skin with hair Nature. 2018 Sep;561(7722):243-247. doi: 10.1038/s41586-018-0477-4. Epub 2018 Sep 5.
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| J774A.1 cells
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Masanori Itakura, Kosuke Yamaguchi, Roma Kitazawa, Sei-Young Lim, Yusuke Anan, Jun Yoshitake, Takahiro Shibata, Lumi Negishi, Hikari Sugawa, Ryoji Nagai, Koji Uchida
Histone functions as a cell-surface receptor for AGEs Nat Commun. 2022 May 27;13(1):2974. doi: 10.1038/s41467-022-30626-8.
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